Browse of TCMCG007C03504 protein

CDS

Accession Number	TCMCG007C03504
gbkey	CDS
Protein Id	XP_009122061.2
Location	complement(join(18053163..18054400,18054482..18056252,18056367..18057716,18057802..18058746))
Gene	LOC103846814
GeneID	103846814
Organism	Brassica rapa

Protein

Length	1767aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA249065
db_source	XM_009123813.3
Definition	ATP-dependent RNA helicase DEAH12, chloroplastic isoform X1 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category	A
Description	Helicase domain-containing protein IBR domain-containing protein zinc finger protein-related
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko03041        [VIEW IN KEGG]
KEGG_ko	ko:K12818        [VIEW IN KEGG]
EC	3.6.4.13        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	ko03040        [VIEW IN KEGG] map03040        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0003724        [VIEW IN EMBL-EBI] GO:0003824        [VIEW IN EMBL-EBI] GO:0004004        [VIEW IN EMBL-EBI] GO:0004386        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005730        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0008026        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0008186        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016462        [VIEW IN EMBL-EBI] GO:0016787        [VIEW IN EMBL-EBI] GO:0016817        [VIEW IN EMBL-EBI] GO:0016818        [VIEW IN EMBL-EBI] GO:0016887        [VIEW IN EMBL-EBI] GO:0017111        [VIEW IN EMBL-EBI] GO:0031974        [VIEW IN EMBL-EBI] GO:0031981        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0042623        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043228        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043232        [VIEW IN EMBL-EBI] GO:0043233        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0070013        [VIEW IN EMBL-EBI] GO:0070035        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:0140098        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGAGGAGTTCACTTCCTCCGCCCAACAGTGGACGATCGACCACAACTAATCGTCAATTGTCTCTTCCCTCCGCTTCCACCAACCGTTCCAACTCTCGCTCTTCTCACTCTTCTCCGCCGCTCACTCACCGACCCACTCAAAACCACCCCCACCGCAACCACCACTACCCTAACTCCAATTTCCCGCCAAATCACAGGCCCGATCGGGGCCCAACAACTCGTTCCAGGCCCAATTTCATCGTCCAGCTCGTTCACCCAAGAACCACCACCGCCGCTAACACCGACGCCAATCCCTCTTTCTCGGTTAGAAAGCAAGCGATCATCACCCTCGCTTCTCTCTGCGGAATCCCGGAGGACTCCGTCCATATCCCCCAGCTCGGCTCCGTCGCCGGAACTTTCAATTTTCGCCAATGGACCGACGCGCTCTCCGCCGTCGTGTCTCTCTGGGACCATCGCCTCCGAGGGAAGCACGATTTCGTCCCCGAGCTGGTTCCCCACGTCATCGTCCCGTCCGACGTGGACGAGCTTAGAGACAGGCTCCGCGATCTCTTCTCGTCTCACGTTATCTCCCTTGTGGAAAACGGAGAGAGCGTCAGGAAGGTGAGACGCGAGATTGATGAGAAGTCGAGTCGAGTTGAGTCGTTTGATTCCAAAAGGGGTCTTAGGTTAGAGGTGTTTGAGATGAAGAAGGCTTTGGAGGCGGAGAGGGATTTGGTTATTAAGCGGCTTGAAGAATTCAAGAACGCTATGATGAGCATTGTGCGGTTTCTCAAAAGAAGTGATGATGGAGTCGAAGTTGATGACGTGGACGTGTTTAGTTTGGAAGGGGACTATGATTGGCCACGTGTTCATAGTTTAATCCGCAGGGAGTGTCGAAGGCTTGATGATGGGCTGCCTATATATGCTTACCGGCAAAATATTTTGAAGAAAGTTTATGGCCAACAGGTAACGGTATTGATTGGAGAAACTGGTTCAGGGAAGAGCACTCAGTTAGTTCAGTTCCTTGCTGACTCCGGCATTGCCGCTAGTGAATCGATTGTTTGTACACAGCCAAGGAAAATCGCTGCATTGACATTGGCTGATCGGGTCAGAGAAGAAAGCAATGGTTGTTATGAGGAGGAAGATTCCGTCAGCTGCACTCCAGCTTACTCTTCGGCGGAGAAGTTTAGTGCCAAAGTTGTGTTCATGACGGATAACTGTCTGCTTCAACACTACATTAGAGATAATAGTTTGTCTGGAGTTTCGTGCGTTATTATTGACGAAGCACATGAAAGAAGCTTAAACACGGACCTGGTTTTGGCGTTGCTCAAAGATCTGATGTGCAGAAGAGTTGACTTGAGGCTTGTCATCATGTCCGCCACGGCAGATGCTTACCAGCTTTCGGGGTATTTCTTTGGCTGTGAGATTCTCCGTGTCACCGGAAGGAACTTCCCGGTGGAGATTATATATTCACCTAGTGGTGACACAGAAGGGACTTCATATGCTGATGATGTTGTTAAGAAGGCGATGGAAGTGCATAGAACAGAGAAAGAAGGAACCATCCTCGCCTTCTTGACTTCCCAAGCAGAGGTAGAGTGGGCTTGCGAAAGGTTTATAGCTCCATCTGCAGTCGCTTTGCCTTTGCATGGAAAGCTATCTTTCGAAGAACAGTTTAGGGTTTTCCAGAACTATCCTGGGAGAAGGAAAGTGATATTCGCCACAAATATTGCGGAGACCTCTCTGACTATTCCCGGCGTCAAGTATGTAATTGATTCCGGGATGGTGAAAGAGAGTAAATACGAGGCTAGAACGGGTATGAGCATCCTCAAGGTTTGCAGAGTCAGTAAAAGTTCAGCTCAGCAACGCGCTGGTCGTGCTGGGAGGACGGAAGCTGGAAGATGTTACAGACTCTACTCAAAATACGAGTTTACTTCCATGAGTCTTAATCAGGAGCCTGAGATTCGGAGGGTTCCTCTCGGTGTAGCGATTTTGAGGATTCTTGCGCTGGGTGTAGACAACCTAGCGGATTTTGATTTTATCGACGCGCCTGACCCTGAAGCCGTCGTGATGGCTGTCAAAAATCTTGTTCAGTTGGGTGCAGTCGTTGAGAGGAATGGTGTTCTTGAGTTAACGCAGGAAGGACATTGTTTAGTTAAGCTGGGTCTGGAGCCAAAGCTTGGTAAGTTGATTTTGGGGTGCTTCAGACACAGAATGGGCAAAGAGGGGATTGTTCTCGCTGCTGTCATGGCCAATGCTAGTAGTATATTTTGCAGAGTTGGCAACTTCGATGATAAGATGAAAGCTGACTGCCTAAAGGTGAAATTCTGCAACCATGATGGAGACCTGTTCACTCTTCTTTCGGTGTACAAAGAATGGGCATCTCTGCCGCGAGAGAGAAGAAACAAATGGTGCTGGGAAAATAGCCTGAACGCCAAATCAATGAGGAGATGCGAAGACACAGTCAAGGAGCTGGAGATATGCATTGAAAGAGAACTTTCTCTTGTCAGTCCAAGCTACTGGGTTTGGAACCCAGCAGAGGGTAATAATAAACACGAGAAGCATATGAAAATGGTTATACTTGCATCTCTTGCTGAAAACGTGGCGATGTACACTGGCTATGACCAGCTCGGGTATGAGGTGGCATTGACTGGGCAACAAGTTCAGTTGCATCCGTCGTGTTCGTTGCTAGCGTTTGGACAGAAGCCAAACTGGGTTGTTTTCGGCGAGCTTCTGTCAGTTGTCGACCAGTACTTGGTATGTGTGACCGCATTTGATTTCGAGGCTTTGTCTACGCTTGATCCACCTCCACCTTTTGATGCGTCTCATATGGATGAGTGGAGGGTCCGAGTGAAAAAGGTGGCTGGTTGTAGCAGCACTATGCTAAAACGATTCTGTGGGAAATCTAACCGTGGTCTGCTTTCGATTGTCTCTCGTGCTAGGTCTCTTTGTGAGGATGAGAGGATTAATATTCAAGTTAATGTCGAACAGAACGAGATTCTAATGTACGCGCCTCCCCACGACATGGACAAAGTCTCGGCACTAGTGAACGATGCATTGGAATGTGAAAAGAAGTTGATGCGTAATGAATGTTTGGAGAAGTATATATATCATGGAGGAGGACAGGTGCCCCTTGCGCTGTTCGGATCTGGTGCTCAGATAAAGCATCTTGAAGTTGATCAGAGATTCTTGACAGTCGATGTACTCTATTACGGCGACAACTCTCTTGATGACAGAGAGGTTCTGACGTTCCTGGAGAAGGAGATCGATGGATGTATCTGCTCTATTCATAAGTATGCTGGTAAGAAGCAAGACTGTGATGAGAAAGAGAAGTGGGGTAGGGTTACCTTTCTGACTCCGGAATCTGCTATGAAGGCAACAGAAACTCAGAAGTTTGATCTCAATGGATCAGTGATTAAACTATTTCCATCGCTATCAGCTGGTGGTGAAGGAGTTTTCAAGATGCCTTCTGTTACAGCTATCATTCGTTGGCCTCGAAGGGAAAGTTGTGGTAAAGGTGTTCTTAAGTGTGCTTCTGGTGATATTCACAGAATCTTTGCTGGGTCATCCGGCATCATGATAGGAACAAAATATTGCCCCTTTGAGACGGATCAAAAACACACTGATTCTATCTTGATTACTGGTATTGACACAAATCTTTCGGATGCTGAAGTTTTAGATGTTTTGGAGTTCGCTACGGAGAGGACAGATTTAGAATTTTTCTTATTCAGAGGAGGAAATATTGCGTATCGTCCATCTCTTACTGATTGTAAATATATGCTGCATAAGAGAATATTTGCGCGCTTGTCATCGAGGAATCCAGACCCAAACTGTGTCGAAGTCAAAGTTTATGTACCAAAAGAAAAGGATCATTTTGTGCGAGCGTTGATTACTTTTGATGGGAGATTACATCTGGAAGCTGCGAAAGCTTTGCAGGAGTTAGATGGAACTATCCTAGATGGATGCTATCCATGGCAGAAGATAAAATGCGAGCAAAAGTTTCAGAGCTCCATAATCTGTCCTGCTTTTATCTACAACATAGTCAGAAGACAATTATATGCTAAGCTAGCAAGCTTCGAGAGACAAAGAGAATGTGAATGGCATCTGGAGGCAATTCATAGTGGTGCTTATCGTGTTAAAATCTCCGCAAATGCAACAAGACGCATCTCGGAGATGCGGAGATCTCTCGAAGAACTCATAAGAGGAAGACCCATAATAAACCATCCAAGCTTAACCCAAAGGGTCTTGCAGCATCTTTTGTCCAGAGAAGGTGTTATCCTGATGCGAAAGATCCAACAGGAGACTGAAACTTGCATTGTGGTAGACAGGCACAGTCTCGCAGTACGCATTTGTGGATCAGAAGAGAGAATTGCTGCGGCTGAACAAGAGCTGGTTCGGTCGCTTCTGTCTTATCACGAGAGCAAGCAGCTTGAAATCCGCCTCCGAGGTCCGAATCTCCGTCCTGACCTCATGAAGGAAGTTGTGAATCGGTTTGGTCCAGAGCTCCAAGGTATTAAAGAAAAGGTAAAAGGTGTGGATCTCAAGCTCAACACTCGGTACCATGTTATTCATGTTCATGGGAGCGTGGAGATGAGGCAGGAAGTAGAGAAGATGGTCTATGAACTTACACAGGAAGAAGGTTGTGCACCAGATGACGTTGAAGTTGAATGCCCCATTTGCTTATCTGAGGTTGAGGATGGCTACTCTCTCGAAGGATGTTCACACCTCTTCTGCAAAGCTTGTTTGTTGGAACAGCTCGAGGCGTCGATGAGAAACTTCGACGCATTTCCCATAATCTGTTCTCACATAGACTGTGGAGCTCCGATAGTAGTGGCCGATATGAGAGCCCTCTTATCACAAGAGAAGCTCGACGAACTCTTCAGAGCATCCCTCTCCTCTTTCGTAACAACCAGCGATGGGAAGTTCAGGTTCTGCTCCACACCCGATTGCCCTTCCATCTACCGCGTAGCCGGTCCTCTAGATTCAGGGGTGCCATTTTTCTGCGGAGCGTGTAACTCAAAGACATGCACGAGGTGCCACCTGGAGTATCACCGGTATATCACTTGCGAAAGGTACAAACTGTTCAAGGAGGATCCGGACATGTCGTTGAAGGACTGGGCGAAAGGGAAGAACGTGAAGGAGTGTCCGTGTTGCAAGTCCACCATAGAGAAATCTGAAGGGTGTAACCATCTGCTGTGCCGGTGTGGGAACCACATTTGCTGGGTCTGCTTAAGGTGGTTCGCTCAACAAGAACCTTGTTATGAACATTTGAGAGCAGTCCATGGTGGGATAGGCCTCTTCGATGAGCTAGGGATGGCCATGCTTTGA

Protein:   MRSSLPPPNSGRSTTTNRQLSLPSASTNRSNSRSSHSSPPLTHRPTQNHPHRNHHYPNSNFPPNHRPDRGPTTRSRPNFIVQLVHPRTTTAANTDANPSFSVRKQAIITLASLCGIPEDSVHIPQLGSVAGTFNFRQWTDALSAVVSLWDHRLRGKHDFVPELVPHVIVPSDVDELRDRLRDLFSSHVISLVENGESVRKVRREIDEKSSRVESFDSKRGLRLEVFEMKKALEAERDLVIKRLEEFKNAMMSIVRFLKRSDDGVEVDDVDVFSLEGDYDWPRVHSLIRRECRRLDDGLPIYAYRQNILKKVYGQQVTVLIGETGSGKSTQLVQFLADSGIAASESIVCTQPRKIAALTLADRVREESNGCYEEEDSVSCTPAYSSAEKFSAKVVFMTDNCLLQHYIRDNSLSGVSCVIIDEAHERSLNTDLVLALLKDLMCRRVDLRLVIMSATADAYQLSGYFFGCEILRVTGRNFPVEIIYSPSGDTEGTSYADDVVKKAMEVHRTEKEGTILAFLTSQAEVEWACERFIAPSAVALPLHGKLSFEEQFRVFQNYPGRRKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEARTGMSILKVCRVSKSSAQQRAGRAGRTEAGRCYRLYSKYEFTSMSLNQEPEIRRVPLGVAILRILALGVDNLADFDFIDAPDPEAVVMAVKNLVQLGAVVERNGVLELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVMANASSIFCRVGNFDDKMKADCLKVKFCNHDGDLFTLLSVYKEWASLPRERRNKWCWENSLNAKSMRRCEDTVKELEICIERELSLVSPSYWVWNPAEGNNKHEKHMKMVILASLAENVAMYTGYDQLGYEVALTGQQVQLHPSCSLLAFGQKPNWVVFGELLSVVDQYLVCVTAFDFEALSTLDPPPPFDASHMDEWRVRVKKVAGCSSTMLKRFCGKSNRGLLSIVSRARSLCEDERINIQVNVEQNEILMYAPPHDMDKVSALVNDALECEKKLMRNECLEKYIYHGGGQVPLALFGSGAQIKHLEVDQRFLTVDVLYYGDNSLDDREVLTFLEKEIDGCICSIHKYAGKKQDCDEKEKWGRVTFLTPESAMKATETQKFDLNGSVIKLFPSLSAGGEGVFKMPSVTAIIRWPRRESCGKGVLKCASGDIHRIFAGSSGIMIGTKYCPFETDQKHTDSILITGIDTNLSDAEVLDVLEFATERTDLEFFLFRGGNIAYRPSLTDCKYMLHKRIFARLSSRNPDPNCVEVKVYVPKEKDHFVRALITFDGRLHLEAAKALQELDGTILDGCYPWQKIKCEQKFQSSIICPAFIYNIVRRQLYAKLASFERQRECEWHLEAIHSGAYRVKISANATRRISEMRRSLEELIRGRPIINHPSLTQRVLQHLLSREGVILMRKIQQETETCIVVDRHSLAVRICGSEERIAAAEQELVRSLLSYHESKQLEIRLRGPNLRPDLMKEVVNRFGPELQGIKEKVKGVDLKLNTRYHVIHVHGSVEMRQEVEKMVYELTQEEGCAPDDVEVECPICLSEVEDGYSLEGCSHLFCKACLLEQLEASMRNFDAFPIICSHIDCGAPIVVADMRALLSQEKLDELFRASLSSFVTTSDGKFRFCSTPDCPSIYRVAGPLDSGVPFFCGACNSKTCTRCHLEYHRYITCERYKLFKEDPDMSLKDWAKGKNVKECPCCKSTIEKSEGCNHLLCRCGNHICWVCLRWFAQQEPCYEHLRAVHGGIGLFDELGMAML